- Tracked ACP tool-call inputs per session and replayed them via `toolArgsById`/`getToolArgs` plumbing.
- Merged ACP tool execution end content from start and result events so command output replay preserves original args.
- Scoped ACP async-job draining by session `ownerId` and `agentId` with in-flight tracking and permission-gated deferred turns.
- Refactored compaction telemetry and async tests with per-test telemetry setup and asynchronous teardown resets.
- Held wire-level agent_end until #promptInFlightCount drops to 0, preventing AgentBusyError when subscribers fire the next prompt synchronously from agent_end.
- Added #pendingAgentEndEmit field and #flushPendingAgentEnd(), called from #endInFlight and #resetInFlight.
- Added regression test covering re-entrant prompt() from agent_end listener.
- Added `providerRetryWait` and `retryWait` hooks to stream/usage options so tests bypass real scheduler delays.
- Parameterized GitHub Copilot poll intervals and Copilot model retry base delay for fast test execution.
- Replaced `Bun.sleep`/`setTimeout` polling loops with `AbortSignal` event listeners in agent session tests.
- Consolidated auth-gateway E2E helpers into a shared `test/helpers` module, eliminating duplicated `checkGatewayAvailable` implementations.
- Migrated credential-disabled tests from SQLite-backed stores to an in-memory store, removing temp-dir lifecycle overhead.
- Non-interrupting tool-source TTSR matches now prepend a system-reminder to the matched tool's `toolResult` content instead of queuing a loop-wide deferred follow-up turn.
- Text/thinking source matches retain the previous deferred-injection behavior.
- Added deduplication so one rule attaches to exactly one sibling tool call per batch.
- Stale per-tool injections are cleared on abort/error before tools produce results.
- Added canonical `pi.zod` schema API exports and removed TypeBox package exports/imports.
- Migrated Tool schema typing from TypeBox to shared `TSchema`/Zod flow with legacy TypeBox compatibility.
- Updated AI provider adapters and MCP/agent builders to convert tool params through `toolWireSchema()`.
- Reworked schema validation from AJV to Zod-safe parsing with `fromTypeBox`, `toolWireSchema`, and meta schema checks.
- Replaced custom MockAssistantStream helpers with createMockModel streams across agent tests.
- Removed manual queueMicrotask stream-event scripting in favor of scripted mock responses.
- Consolidated helper fixtures by deleting local aliases and reusing shared user-message/model helpers.
- Updated test assertions to use mock.calls and mock.model metadata for call and context validation.
- Converted systemPrompt APIs and state types to ordered `string[]` across agent, AI, and coding-agent surfaces.
- Added `normalizeSystemPrompts` and applied it to context normalization before building provider request payloads.
- Updated AI providers to emit separate normalized prompt blocks/messages instead of a single merged system prompt.
- Removed dedicated `projectPrompt` state and remapped that context into system-context buckets in session, dump, and token accounting.
- Aligned tests and changelogs to pass and assert `systemPrompt` as arrays with ordered prompt semantics.
- Add explicit validation rejecting write:"" with the expected error message in normalizeChunkEditOperations.
- Update spark context-promotion tests (it_1, it_2, concurrent it_5) to expect promotion to gpt-5.5 (the new chain target on openai-codex), since spark variants now promote to gpt-5.5 rather than the base codex model.
- Standardized missing-file read errors and now return `File not found: <path>` for absent edit targets.
- Centralized AI provider, usage, and OAuth helpers into shared modules to remove duplicated logic.
- Migrated OAuth/API-key login flows to shared factory helpers and removed inline prompt/token-exchange code.
- Reused shared tools and formatter utilities for discovery, stream tails, LSP batching, and source formatting.
- Consolidated repeated test helpers and fixtures into shared modules, replacing inline helper duplicates.
- Added contract system for validating benchmark commands, metrics, scope paths, constraints, and off-limits paths.
- Contract validation enforces matching initialization parameters against autoresearch.md before init_experiment.
- Segment fingerprinting detects configuration drift and warns when metrics are not directly comparable.
- Added pending run detection and recovery to resume incomplete experiments from .autoresearch/runs/.
- Run directories organize artifacts with benchmark logs and optional checks logs for traceability.
- Extended experiment state to track run number, command, scope, off-limits, constraints, and fingerprint.
- Added `close()` method to SessionManager and AuthStorage for proper resource cleanup and finalization of prepared statements.
- Added `initiatorOverride` option support in OpenAI and Anthropic providers for message attribution control.
- Fixed resource leaks in RpcClient timeout handling by centralizing timeout creation with unref() and adding explicit clearTimeout() calls.
- Fixed AgentSession disposal to call SessionManager's `close()` method for guaranteed resource cleanup instead of fallback flush.
- Updated all test suites to properly dispose AuthStorage instances in cleanup hooks to prevent resource leaks between tests.
- Added public `waitForIdle()` and `getLastAssistantMessage()` APIs to AgentSession for deterministic session state access.
- Refactored deferred continuation scheduling from raw `setTimeout()` to centralized post-prompt task tracking system for concurrent recovery operations.
- Fixed race conditions between deferred TTSR/context-promotion continuations and `prompt()` completion via shared recovery orchestrator.
- Replaced `#waitForRetry()` with `#waitForPostPromptRecovery()` to unify retry and TTSR resume gate handling.
- Fixed TTSR violations during subagent execution aborting the entire subagent run; `#waitForPostPromptRecovery()` now awaits agent idle after TTSR/retry gates resolve, preventing `prompt()` from returning while fire-and-forget `agent.continue()` is still streaming.
- Added comprehensive test case verifying `prompt()` blocks until TTSR continuation with tool calls completes, preventing premature session disposal.
- Implemented TTSR resume gate to ensure `prompt()` blocks until TTSR interrupt continuations complete, preventing race conditions between TTSR injections and subsequent prompts.
- Replaced `#waitForRetry()` with `#waitForPostPromptRecovery()` to handle both retry and TTSR resume gates, ensuring prompt completion waits for all post-prompt recovery operations.
- Added comprehensive test coverage for TTSR resume gate behavior under interrupt and deferred injection modes.
- Reorganized import statements in openai-compat.ts for consistency.
- Consolidated multi-line ternary expression into single line in openai-compat.ts.
- Simplified AgentBusyError instantiation to use default message.
- Updated test assertion to check error type instead of message content.
- Added ModelManager API with createModelManager() factory for managing bundled and dynamically discovered models with configurable refresh strategies.
- Exported discovery utilities for fetching models from Antigravity, Codex, Cursor, Gemini, and OpenAI-compatible endpoints with provider-specific model manager configuration helpers.
- Renamed public API functions for clarity: getModel() -> getBundledModel(), getModels() -> getBundledModels(), getProviders() -> getBundledProviders().
- Added on-disk model caching with TTL-based invalidation and resolveProviderModels() function for runtime model resolution with source precedence.
- Refactored model discovery script to dynamically fetch models from Codex, Cursor, and Antigravity using OAuth credentials instead of hardcoded lists.
- Migrated authentication storage from JSON-based (auth.json) to database-based (agent.db) format across test files and configuration.
- Simplified auth storage discovery in sdk.ts by removing manual path construction and fallback logic in favor of centralized getAgentDbPath() function.
- Removed dbPath instance property from AuthStorage class as database path is now managed centrally.
- Updated environment variable precedence documentation to reflect agent.db instead of auth.json as the lowest priority source.
- Removed OAuth provider section header comments from multiple test files for cleaner test organization.
- Added support for JSON and JSONC configuration file formats without requiring migration to YAML.
- Replaced nanoid and randomUUID with Snowflake ID generator across codebase for consistent distributed ID generation.
- Created new Snowflake utility module in packages/utils with support for 64-bit distributed ID generation with configurable epoch, machine ID, and sequence numbers.
- Updated session ID format documentation from nanoid to snowflake hex string format (16 hex characters).
- Removed nanoid dependency from package.json as it is now replaced by internal Snowflake implementation.
- Replaced SettingsManager class with new Settings singleton providing synchronous get/set API and background persistence.
- Introduced settings-schema.ts as single source of truth for all configuration definitions with 100+ settings organized into logical groups.
- Migrated from method-based settings access (getTheme(), setTheme()) to path-based access using dot notation (settings.get('theme'), settings.set('theme', value)).
- Removed 2035-line settings-manager.ts file and replaced with modular settings.ts (693 lines) and settings-schema.ts (836 lines) for improved maintainability.
- Unified settings schema into single source of truth eliminating duplicate definitions across settings-defs.ts and settings-manager.ts.
- Extracted delta event batching and throttling logic into AssistantMessageEventStream base class to eliminate duplication across test mocks.
- Changed access modifiers from private to protected in EventStream class to allow subclass customization of queue, waiting, and completion handling.
- Simplified MockAssistantStream implementations across five test files by removing custom event handling logic and delegating to AssistantMessageEventStream.
- Added protected methods deliver() and endWaiting() to EventStream to support subclass event delivery patterns.
- Implemented delta event type guard and merging utilities to consolidate event batching logic in one place.
- Removed Prettier configuration files (.prettierignore and .prettierrc) and migrated formatting to Biome.
- Updated Biome configuration from version 2.3.11 to 2.3.12 and changed arrowParentheses rule from 'always' to 'asNeeded'.
- Pinned @biomejs/biome dependency to exact version 2.3.12 in package.json and bun.lock.
- Applied consistent arrow function formatting across 489 files by removing unnecessary parentheses around single parameters.
- Removed blank lines after comment blocks and reorganized imports for consistency across the codebase.
- Converted named imports from node modules (fs, path, os) to namespace imports across all packages.
- Extended extension loader error handling with isEacces and hasFsCode type guards.
- Converted readdirSync, readFileSync, and statSync to async readdir, readFile, stat across skills and agent discovery.
- Made scanDirectoryForSkills async and refactored custom directory scanning to use Promise.all for concurrent processing.
- Updated agent discovery to use fs/promises for async file reading and refactored helper patterns.
- Added AgentParsingError exception class for better error handling during agent parsing.
- Added filesystem error type guards (isEnoent, isEacces, isPerm, etc.) to pi-utils for safe error checking.
- Added color manipulation utilities to pi-utils for accessibility features.
- Added color-blind mode setting to settings manager.
- Migrated plugins, settings, and config modules from sync to async file operations.
- Updated error handling to use new pi-utils type guards for type-safe checking.
- Added tsconfig.publish.json files to all packages with optimized publish-time configuration.
- Updated all package.json scripts with prepublishOnly hooks for correct type checking during publish.
- Added @oh-my-pi/omp-stats path mappings to root tsconfig.json for consistent imports.
- Added WASM generation script for photon module and integrated into install:dev script.
- Added mermaid rendering with terminal graphics for markdown output in iTerm2 and Kitty terminals.
- Implemented two-level mermaid caching with deduplication by content hash.
- Added background mermaid pre-rendering in assistant messages for responsive display.
- Implemented Python kernel session pooling with MAX_KERNEL_SESSIONS limit and idle cleanup timer.
- Refactored commit agent to remove unused FileObservation type and improve prompts.
- Updated test utilities to use AuthStorage.create() async factory method.
- converted relative imports to path aliases ($c/*, $ai/*, $tui/*, etc.) across all packages
- added per-package tsconfig.json with complete path mappings for runtime resolution
- set importModuleSpecifier to non-relative for IDE auto-import preferences
- updated dev script to run from monorepo root for consistent path resolution
- Created new @oh-my-pi/pi-utils workspace package with shared utilities for logging, process management, stream handling, and temporary directory management.
- Migrated all packages to use centralized logger from @oh-my-pi/pi-utils instead of local winston implementations.
- Replaced custom process spawning and stream reading implementations with standardized cspawn and readLines utilities across all modules.
- Converted synchronous file operations and process spawning to async patterns using Bun shell syntax and fs/promises.
- Added streaming edit abort functionality with configurable setting to abort on patch preview failures.
- Updated test framework from vitest to bun:test across all test suites.
- Converted SettingsManager.create(), loadSettings(), discoverSkills(), loadSlashCommands(), buildSystemPrompt(), loadSkills(), loadProjectContextFiles(), and getShellConfig() from synchronous to asynchronous APIs.
- Changed capability provider load() method from supporting both sync and async to async-only by removing loadSync().
- Removed fs property from LoadContext interface in capability types.
- Added new fs.ts module with caching layer for filesystem operations using readFile, readDirEntries, readDir, walkUp, and cache management functions.
- Refactored all discovery providers (builtin, claude, cline, codex, cursor, gemini, github, mcp-json, ssh, vscode, windsurf) to use async file operations with Promise.all for parallel loading.
- Port pi-ai from upstream with Bun-first approach (source files, no dist)
- Add cli_ prefix to tool names in OAuth mode to avoid collisions
- Improve beta header handling with proper deduplication
- Convert codex-instructions.md to Bun text embed
- Strip .js extensions from all imports
- Added in-memory session storage abstraction with SessionStorage interface and MemorySessionStorage implementation.
- Added configurable bash interceptor rules with pattern-based command interception settings.
- Added AbortSignal support to 80+ web scrapers for request cancellation.
- Changed task tool to require explicit task `id` field and single `agent` parameter at top level.
- Removed `submit_review` tool - reviewers now use `complete` tool with structured output.
- Replaced Date.now() and crypto.randomUUID() with nanoid() for unique ID generation throughout codebase.
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