- converted relative imports to path aliases ($c/*, $ai/*, $tui/*, etc.) across all packages
- added per-package tsconfig.json with complete path mappings for runtime resolution
- set importModuleSpecifier to non-relative for IDE auto-import preferences
- updated dev script to run from monorepo root for consistent path resolution
- Added cell-by-cell Python execution tracking with duration and exit codes.
- Added template system with {{placeholders}} for task tool context rendering.
- Enhanced patch applicator to preserve exact indentation when intended.
- Changed Python tool to use cells array instead of single code parameter.
- Updated task tool schema to require vars instead of task field.
- Moved test files from src/core to test/core directory.
- Moved test files from src/core/tools to test/tools directory.
- Moved test files from src/discovery to test/discovery directory.
- Updated import paths to reflect new test file locations.