Native user-level config discovery (MCP, skills, rules, slash commands, prompts, instructions, hooks, tools, settings, extensions, and the top-level SYSTEM.md/RULES.md/AGENTS.md) now resolves the user scope through getAgentDir() in builtin.ts, omp-extension-roots.ts, and the discovery-layer getUserPath() helper. A named profile sees only its own ~/.omp/profiles/<name>/agent config instead of the default profile's ~/.omp/agent leaking into every profile, matching the /mcp config writer and getMCPConfigPath("user").
discoverExtensionModulePaths now detects top-level symlinked directories that the native glob skips (follow_links=false) and synthesizes their index/package.json entry-point matches, so an extension shared across profiles via a symlink loads like a real directory. Symlinked extension files were already handled.
cli: check --tiny-worker on the profile-flag-stripped resolvedArgv, matching the adjacent --smoke-test check and launch routing.
- Moved documentation files from packages/coding-agent/docs/ to root docs/ directory to flatten the documentation structure.
- Updated all internal documentation links to account for the new file locations, adjusting relative paths to maintain correct references across the monorepo.
- Updated README.md and issue template configuration to reference documentation at the new root docs/ location instead of packages/coding-agent/docs/.
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