- Added process-wide singleton instances for InternalUrlRouter, AsyncJobManager, and MCPManager.
- Changed internal URL protocols to resolve through registered sessions and scan all active roots/datasets for matches.
- Refactored agent, artifact, memory, rule, skill, jobs, and mcp handlers to use shared manager and rule/skill state.
- Removed per-session protocol/tool wiring and switched tests to initialize and reset global singleton state.
- Renamed the `notes://` protocol to `local://` for better clarity.
- Updated all internal references, prompts, and tool documentation.
- Migrated plan storage paths to use the new `local://` scheme.
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