- Added process-wide singleton instances for InternalUrlRouter, AsyncJobManager, and MCPManager.
- Changed internal URL protocols to resolve through registered sessions and scan all active roots/datasets for matches.
- Refactored agent, artifact, memory, rule, skill, jobs, and mcp handlers to use shared manager and rule/skill state.
- Removed per-session protocol/tool wiring and switched tests to initialize and reset global singleton state.
- Added immutable metadata to protocol handlers and had the router copy each handler's setting onto resolved internal resources.
- Updated read and search tools to honor `resource.immutable`, and made search suppress hashline anchors only for immutable source paths while preserving them for mutable files.
- Expanded internal URL tests to cover mutable local resources and mixed immutable/mutable search input hashline behavior.
- Removed Prettier configuration files (.prettierignore and .prettierrc) and migrated formatting to Biome.
- Updated Biome configuration from version 2.3.11 to 2.3.12 and changed arrowParentheses rule from 'always' to 'asNeeded'.
- Pinned @biomejs/biome dependency to exact version 2.3.12 in package.json and bun.lock.
- Applied consistent arrow function formatting across 489 files by removing unnecessary parentheses around single parameters.
- Removed blank lines after comment blocks and reorganized imports for consistency across the codebase.
- Removed WASM generation script; use Bun `wasm?raw` loader for imports.
- Added bunfig.toml with loaders for `.md`, `.py`, and `.wasm?raw` text imports.
- Added types/assets/index.d.ts for global TypeScript module declarations.
- Unified TypeScript configuration with tsgo-based checking across monorepo.
- Removed build and WASM steps from install and publish pipelines.
- Added tsconfig.publish.json files to all packages with optimized publish-time configuration.
- Updated all package.json scripts with prepublishOnly hooks for correct type checking during publish.
- Added @oh-my-pi/omp-stats path mappings to root tsconfig.json for consistent imports.
- Added WASM generation script for photon module and integrated into install:dev script.
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