- Added `scripts/**/*.ts` to the linter and formatter inclusion list in `biome.json`.
- Replaced manual array index searches with standard `indexOf` operations.
- Cleaned up unused variables, obsolete helpers, and command-line flags.
- Applied consistent formatting and code style across tooling scripts.
- Fixed bash interceptor to check both raw and cwd-normalized commands, catching commands hidden behind leading `cd ... &&` wrappers.
- Fixed LSP client shutdown to await graceful shutdown with a 5s timeout before killing the process, and parallelized `shutdownAll` via `Promise.allSettled`.
- Fixed concurrent bash command tracking by replacing a single abort controller with a Set, preventing premature cancellation of parallel commands.
- Removed `./hooks` and `./hooks/*` export entries from the coding-agent package exports map.
- Updated pinned Rust nightly toolchain from `nightly-2026-03-27` to `nightly-2026-04-29` in `rust-toolchain.toml` and CI workflow.
- Replaced custom already-published detection in `ci-release-publish.ts` with `bun publish --tolerate-republish` flag.
- Migrated all package tsconfig files to extend tsconfig.workspace.json for unified TypeScript configuration across monorepo.
- Consolidated build and check scripts across 10+ packages to use biome for linting/formatting with separate type checking via tsgo.
- Renamed build scripts from build:native and build:binary to build for simplified command naming across packages/natives and packages/coding-agent.
- Refactored CI workflow to invoke bun tasks instead of inline shell scripts, reducing workflow complexity by 40+ lines.
- Removed sync-exports.ts and repro-stuck.ts scripts; deleted path aliases from tsconfig.base.json in favor of workspace-based configuration.
- Updated turbo.json with new task definitions (check:types, lint, fmt, fix) and removed build:native/embed:native tasks.
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