refactor: restructured monorepo TypeScript config and build tasks for unified setup

- Migrated all package tsconfig files to extend tsconfig.workspace.json for unified TypeScript configuration across monorepo.
- Consolidated build and check scripts across 10+ packages to use biome for linting/formatting with separate type checking via tsgo.
- Renamed build scripts from build:native and build:binary to build for simplified command naming across packages/natives and packages/coding-agent.
- Refactored CI workflow to invoke bun tasks instead of inline shell scripts, reducing workflow complexity by 40+ lines.
- Removed sync-exports.ts and repro-stuck.ts scripts; deleted path aliases from tsconfig.base.json in favor of workspace-based configuration.
- Updated turbo.json with new task definitions (check:types, lint, fmt, fix) and removed build:native/embed:native tasks.

packages/utils/package.json

@@ -23,8 +23,12 @@
 	"main": "./src/index.ts",
 	"types": "./src/index.ts",
 	"scripts": {
-		"check": "tsgo -p tsconfig.json",
-		"test": "bun test"
+		"check": "biome check . && bun run check:types",
+		"check:types": "tsgo -p tsconfig.json --noEmit",
+		"lint": "biome lint .",
+		"test": "bun test",
+		"fix": "biome check --write --unsafe .",
+		"fmt": "biome format --write ."
 	},
 	"dependencies": {
 		"beautiful-mermaid": "^1.1",
@@ -33,7 +37,8 @@
 		"winston-daily-rotate-file": "^5.0"
 	},
 	"devDependencies": {
-		"@types/bun": "^1.3"
+		"@types/bun": "^1.3",
+		"@oh-my-pi/pi-natives": "workspace:*"
 	},
 	"engines": {
 		"bun": ">=1.3.7"
@@ -49,6 +54,7 @@
 		"./*": {
 			"types": "./src/*.ts",
 			"import": "./src/*.ts"
-		}
+		},
+		"./*.js": "./src/*.ts"
 	}
 }